Clostridium perfringens

Taxonomy
Taxonomy database identifier: 1502
Superkingdom Bacteria
Phylum Firmicutes
Class Clostridia
Order Clostridiales
Family Clostridiaceae
Genus Clostridium
Species perfringens
Peptidase View peptidase sequences from Clostridium perfringens
Count of known and putative peptidases: 168, non-peptidase homologues 59
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
A- A36 unassigned family A36 unassigned peptidases MER0067502 spoIIGA CPR_1734
AC A8 non-peptidase homologue family A8 non-peptidase homologues MER0067516 AC1_A0051/AC3_A0742/AC5_A0118 CPR_0074
AD A24 unassigned subfamily A24A unassigned peptidases MER1158129
AD A24 unassigned subfamily A24A unassigned peptidases MER1158017
AD A24 unassigned subfamily A24A unassigned peptidases MER1158117
AD A24 unassigned family A24 unassigned peptidases MER0016851 CPF_2571
AE A25 A25.001 gpr peptidase MER0016852 gpr CPE2041
C- C75 unassigned family C75 unassigned peptidases MER0125997 CPR_1532
C- C75 unassigned family C75 unassigned peptidases MER0125892 CPF_0865
C- C75 unassigned family C75 unassigned peptidases MER0125976 CJD_2127
CA C110 C110.UPW family C110 unassigned peptidases MER0626938
CA C39 C39.001 bacteriocin-processing peptidase MER0069929 AC3_0173
CA C39 C39.001 bacteriocin-processing peptidase MER0069927 CPR_0658
CA C39 C39.004 mersacidin lantibiotic processing peptidase MER0445768 AC1_A0446
CA C39 unassigned family C39 unassigned peptidases MER0446131 CPR_0318
CD C11 unassigned subfamily C11A unassigned peptidases MER1169538
CD C11 unassigned family C11 unassigned peptidases MER0016853 cloSI CPF_0840
CD C14 unassigned subfamily C14B unassigned peptidases MER0429428
CD C80 unassigned family C80 unassigned peptidases MER0032302 tpeL
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0016854 pcp CPE1425
CL C60 C60.002 sortase B MER0025281 AC5_0519
CL C60 C60.006 sortase A (Streptococcus-type) MER0125971 AC3_0237
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0142259 CPC_A0210
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0315874 pBeta2_00066
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0143370 CJD_A0424
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0070003 AC7_0139
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0067485 CPF_0773
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0025267 AC3_0270
CL C60 C60.007 sortase C1 (Streptococcus sp.) MER0329743
CL C60 unassigned subfamily C60A unassigned peptidases MER0116754 AC3_A0689
CL C60 unassigned subfamily C60A unassigned peptidases MER0125389 AC3_A0283
CL C60 unassigned subfamily C60A unassigned peptidases MER0126097 AC1_A0283
CL C60 unassigned subfamily C60A unassigned peptidases MER0124748 CJD_A0007
CL C60 unassigned subfamily C60A unassigned peptidases MER0126765 CJD_1867
CL C60 unassigned subfamily C60A unassigned peptidases MER0729125 pBeta2_00017
CL C60 unassigned subfamily C60A unassigned peptidases MER0723771 AC1_0651/HA1_05532
CL C60 unassigned subfamily C60A unassigned peptidases MER0033843 CPE2315
CL C60 unassigned subfamily C60A unassigned peptidases MER0033834 CPF_0212
CL C60 unassigned subfamily C60A unassigned peptidases MER0025252 PCP56
CL C60 unassigned subfamily C60A unassigned peptidases MER0067484 HA1_03974
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0740407 AC1_1647/AC3_16/AC5_1552/CPC_1466/CPE1244
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0737734 AC1_0032/AC3_0/AC3_0028/CPR_0028
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0742995 AC5_0024/HA1_00110
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0737338 CJD_A0695
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0737574 HA1_07777
CL C82 non-peptidase homologue subfamily C82A non-peptidase homologues MER0737649 CPE0024
CO C40 C40.007 YddH peptidase MER0014671 orf14
CO C40 C40.007 YddH peptidase MER0176517 AC1_0498
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0162981 AC3_A0314
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453454 AC1_A0257
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453538 HMPREF9476_03054
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453539 HMPREF9476_03101
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453550 HA1_05607
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453780
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453783
CO C40 C40.010 CwlO peptidase (Bacillus sp.) MER0453785
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0453781
CO C40 non-peptidase homologue family C40 non-peptidase homologues MER0453784
CO C40 unassigned family C40 unassigned peptidases MER0016855 CPE1132
CO C40 unassigned family C40 unassigned peptidases MER0031198 PBCN15/tcpG pTet_028
CO C40 unassigned family C40 unassigned peptidases MER0031197 HA1_08317
CO C40 unassigned family C40 unassigned peptidases MER0453540 HMPREF9476_01007
CO C40 unassigned family C40 unassigned peptidases MER0453565 entB
CO C40 unassigned family C40 unassigned peptidases MER0160785 AC3_A0135
CO C40 unassigned family C40 unassigned peptidases MER0016856 CPC_0305
G- G5 G05.007 MroQ peptidase (Staphylococcus aureus) MER0067486 CPR_0879
G- G5 unassigned family G5 unassigned peptidases MER0935230 AC3_A0146
G- G5 unassigned family G5 unassigned peptidases MER0911158 AC1_0150/CJD_1226
G- G5 unassigned family G5 unassigned peptidases MER0936380 CP4_3457
G- G5 unassigned family G5 unassigned peptidases MER0939105 HA1_04802
G- G5 unassigned family G5 unassigned peptidases MER0067487 CPF_0998
G- G5 unassigned family G5 unassigned peptidases MER0067517 CPR_0129
G- G5 unassigned family G5 unassigned peptidases MER0069925 CPR_0234
G- G5 unassigned family G5 unassigned peptidases MER0069930 CPR_1085
MA M3 M03.010 Pz-peptidase A MER0020152 CPF_2632
MA M3 unassigned subfamily M3B unassigned peptidases MER0016866 pepF AC5_1825
MA M4 M04.011 lambda toxin MER0002103 AC1_A0346
MA M9 M09.002 collagenase G/A (Clostridium histolyticum) MER0173476
MA M9 M09.005 collagenase ColT (Clostridium tetani) MER0001183 colA CPE0173
MA M41 M41.021 FtsH peptidase (Thermotoga-type) MER0016907 ftsH CPF_2786
MA M41 unassigned family M41 unassigned peptidases MER0016908 ftsH CPE0598
MA M60 M60.006 ZmpB peptidase (Clostridium perfringens) MER1137211 CPF_1489
MA M60 unassigned family M60 unassigned peptidases MER0125977 CJD_A0567
MA M78 unassigned family M78 unassigned peptidases MER0909592 CPC_2415
MA M78 unassigned family M78 unassigned peptidases MER0144963 AC3_1150
MA M78 unassigned family M78 unassigned peptidases MER0144949 CPF_1020
MC M14 non-peptidase homologue family M14 non-peptidase homologues MER0836288 bcn_2
MD M15 unassigned subfamily M15B unassigned peptidases MER0016867 AC5_1753
ME M16 unassigned subfamily M16B unassigned peptidases MER0016868 AC5_2268
ME M16 unassigned subfamily M16C unassigned peptidases MER0015260 hypA CPE1402
ME M16 unassigned family M16 unassigned peptidases MER0016869 CPR_2037
MF M17 unassigned family M17 unassigned peptidases MER0016870 pepA CPE2501
MG M24 unassigned subfamily M24A unassigned peptidases MER0016879 map CPE2383
MG M24 unassigned subfamily M24A unassigned peptidases MER0016880 map AC5_1757
MG M24 unassigned subfamily M24B unassigned peptidases MER0020332 CPR_0854
MG M24 unassigned subfamily M24B unassigned peptidases MER0016893 HA1_14541
MG M24 unassigned subfamily M24B unassigned peptidases MER0016894 pepP CJD_3172
MH M18 unassigned family M18 unassigned peptidases MER0016872 CPC_1259
MH M18 unassigned family M18 unassigned peptidases MER0016871 AC3_0724
MH M20 M20.003 peptidase T MER0016874 pepT CPE0025
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER1230409
MH M20 non-peptidase homologue family M20 non-peptidase homologues MER0033844 CPR_2450
MH M20 unassigned subfamily M20A unassigned peptidases MER0016876 CPR_1231
MH M20 unassigned subfamily M20B unassigned peptidases MER0016875 pepT CPE2463
MH M20 unassigned subfamily M20C unassigned peptidases MER0016895 pepD AC7_2404
MH M20 unassigned subfamily M20C unassigned peptidases MER0016896 pepD AC3_2846
MH M20 unassigned family M20D unassigned peptidases MER0016906 CPE1032
MH M20 unassigned family M20D unassigned peptidases MER0067488 HMPREF9476_00433
MH M20 unassigned family M20D unassigned peptidases MER0016905 AC1_1608
MH M28 unassigned subfamily M28C unassigned peptidases MER0663078
MH M28 unassigned subfamily M28F unassigned peptidases MER0122270 AC5_1181
MH M28 unassigned subfamily M28F unassigned peptidases MER1252096
MH M28 unassigned subfamily M28F unassigned peptidases MER0016897 CPR_2137
MH M42 unassigned family M42 unassigned peptidases MER0016909 CPF_1252
MJ M19 unassigned family M19 unassigned peptidases MER0016873 HA1_11439
MJ M38 M38.001 isoaspartyl dipeptidase (metallo-type) MER0016904 iadA AC1_2923
MJ M38 M38.982 urease MER0004805 ureC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067491 pyrC CPR_1200
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067493 CPF_1475
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067494 ade CPF_1476
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0067505 CPR_1951
MJ M38 unassigned family M38 unassigned peptidases MER0067509 nagA CPR_2144
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0033839 CPF_1918
MM M50 unassigned subfamily M50B unassigned peptidases MER0017308 CPE1693
MM M50 unassigned subfamily M50B unassigned peptidases MER0016910 CPR_2101
MO M23 M23.009 Mername-AA292 peptidase MER0016902 CPF_2938
MO M23 M23.014 ShyA D,D-endopeptidase (Vibrio cholerae) MER0404309 AC1_2787
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0016901 CPF_2447
MO M23 non-peptidase homologue subfamily M23B non-peptidase homologues MER0136300 CPC_0305
MO M23 unassigned subfamily M23B unassigned peptidases MER0386972 HMPREF9476_03117
MO M23 unassigned subfamily M23B unassigned peptidases MER0016900 CPR_0189
MO M23 unassigned subfamily M23B unassigned peptidases MER0016903 CPC_1856
MO M23 unassigned subfamily M23B unassigned peptidases MER0067495 CPF_1574
MO M23 unassigned subfamily M23B unassigned peptidases MER0189807 AC7_1386
MO M23 unassigned subfamily M23B unassigned peptidases MER0477596
MQ M29 M29.002 aminopeptidase II (Bacillus-type) MER1256461
MQ M29 M29.002 aminopeptidase II (Bacillus-type) MER0016898 CPR_1965
MQ M29 non-peptidase homologue family M29 non-peptidase homologues MER0016899 AC7_0901
MU M103 M103.UNW family M103 non-peptidase homologues MER0016933 AC7_0360
MU M103 M103.UPW family M103 unassigned peptidases MER0016932 CPC_0353
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0201118 CPR_2495
PA S1 non-peptidase homologue subfamily S1C non-peptidase homologues MER0962701 AC1_3062
PA S1 unassigned subfamily S1C unassigned peptidases MER0016911 CPE2230
PA S55 S55.001 SpoIVB peptidase MER0016928 CPE1814
PA S55 unassigned family S55 unassigned peptidases MER0902302 AC1_2302/AC3_2344/AC5_2175/CPC_2058
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0016863 purF CPF_0674
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0016864 glmS HMPREF9476_02373
PB C59 C59.951 choloylglycine hydrolase MER0019881 cbh CPE0709
PB C59 C59.951 choloylglycine hydrolase MER0093664 PBCN20 HMPREF9476_03076
PB C59 unassigned family C59 unassigned peptidases MER0330231 HMPREF9476_03083
PB C59 unassigned family C59 unassigned peptidases MER0330174 PBCN34
PB C59 unassigned family C59 unassigned peptidases MER0020192 CPR_1155
PC C26 C26.957 GMP synthase MER0067511 guaA HMPREF9476_02320
PC C26 C26.963 carbamoyl-phosphate synthase arginine-specific small chain MER0201119 carA CPR_2577
PC C26 C26.964 CTP synthetase MER0438072 pyrG HMPREF9476_01861
PC C26 C26.A25 trp1 (Schizosaccharomyces pombe) MER0044793 pabA HMPREF9476_00706
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0201114 CPR_0669
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0016865 HA1_12136
PC S51 S51.003 cyanophycinase MER0067510 cphB CPF_2478
PE P1 P01.101 pantetheinyl hydrolase ThnT precursor MER0033838 CPR_1410
SB S8 S08.108 CspB peptidase (Clostridium sp.) MER0014465 cspB CPC_2951
SB S8 S08.158 CspC peptidase (Clostridium sp.) MER0020159 cspC CPE2561
SB S8 S08.159 CspA peptidase (Clostridium sp.) MER0020326 cspA CPE2563
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0969402 AC3_0182
SB S8 non-peptidase homologue subfamily S8A non-peptidase homologues MER0191966 AC3_A0586
SB S8 unassigned subfamily S8A unassigned peptidases MER0067489 prtP CPR_0968
SB S8 unassigned subfamily S8A unassigned peptidases MER0033841 CPR_2071
SB S8 unassigned subfamily S8A unassigned peptidases MER0033840 CPF_2368
SB S8 unassigned subfamily S8A unassigned peptidases MER0069934 CPR_2070
SB S8 unassigned subfamily S8A unassigned peptidases MER0069935 CPR_2071
SB S8 unassigned subfamily S8B unassigned peptidases MER0016913 aprX CPF_2937
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0067490 AC5_1180/CPC_1157/HA1_05862 CPR_0993
SC S9 S09.B04 BSU23640 g.p. (Bacillus subtilis) MER0033842 CPR_2298
SC S9 unassigned subfamily S9C unassigned peptidases MER1024949 AC1_1342
SC S9 unassigned subfamily S9C unassigned peptidases MER0033835 HMPRE
SC S9 unassigned subfamily S9D unassigned peptidases MER0067500 CPF_1833
SC S9 unassigned family S9 unassigned peptidases MER0488944 HA1_01572
SC S9 unassigned family S9 unassigned peptidases MER0033847 lipB CPE0742
SC S9 unassigned family S9 unassigned peptidases MER0033845 CPR_0169
SC S15 non-peptidase homologue family S15 non-peptidase homologues MER1024121 AC3_1283/CJD_1/CJD_1266/CPR_0993
SC S33 non-peptidase homologue family S33 non-peptidase homologues MER0201117 CPR_2201
SC S33 unassigned family S33 unassigned peptidases MER0044792 CPF_1188
SC S33 unassigned family S33 unassigned peptidases MER0033836 CPE0432
SC S33 unassigned family S33 unassigned peptidases MER0067506 CPF_2244
SC S33 unassigned family S33 unassigned peptidases MER0067483 CPF_0769
SE S11 S11.004 K15-type DD-transpeptidase MER0005662 dacA/dacB CPE1801
SE S11 S11.004 K15-type DD-transpeptidase MER0004234 dacF
SE S11 S11.005 D-Ala-D-Ala carboxypeptidase DacF MER0016914 dacF CJD_2383
SE S11 non-peptidase homologue family S11 non-peptidase homologues MER0067492 CPF_1388
SE S11 unassigned family S11 unassigned peptidases MER0016916 dacF AC1_2610
SE S11 unassigned family S11 unassigned peptidases MER0016915 CPC_2224
SF S24 S24.001 repressor LexA MER0016924 lexA CPR_1177
SF S24 S24.005 irvR self-cleaving protein MER0017113 PCP61
SF S24 unassigned family S24 unassigned peptidases MER1042888 CPC_A0182
SF S24 unassigned family S24 unassigned peptidases MER1043451 CPC_A0345
SF S24 unassigned family S24 unassigned peptidases MER1040688 AC3_A0527/CPC_A0232/GLAD_001/GLAD_00132
SF S24 unassigned family S24 unassigned peptidases MER1042627 AC3_0200
SF S24 unassigned family S24 unassigned peptidases MER1043938 AC3_A0082
SF S24 unassigned family S24 unassigned peptidases MER1030144 AC3_A0272
SF S24 unassigned family S24 unassigned peptidases MER1042636 AC1_A0143/lexA
SF S24 unassigned family S24 unassigned peptidases MER1042521 AC1_A0290
SF S24 unassigned family S24 unassigned peptidases MER1041353 AC1_A0336
SF S24 unassigned family S24 unassigned peptidases MER1030228 CJD_1876
SF S24 unassigned family S24 unassigned peptidases MER1042435 CJD_A0493
SF S24 unassigned family S24 unassigned peptidases MER1041572 regCB
SF S24 unassigned family S24 unassigned peptidases MER1043757 HA1_15650
SF S24 unassigned family S24 unassigned peptidases MER1040431 HA1_15870
SF S24 unassigned family S24 unassigned peptidases MER1330052
SF S24 unassigned family S24 unassigned peptidases MER1043831 regC
SF S24 unassigned family S24 unassigned peptidases MER1043924 D049_3101
SF S24 unassigned family S24 unassigned peptidases MER1029989 AC5_A0214/J732_0470
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0002553 AC7_2600
SF S26 S26.011 signal peptidase SipW (Bacillus-type) MER0033837 CPE0514
SF S26 unassigned subfamily S26A unassigned peptidases MER0052115 sipS CPE0430
SF S26 unassigned subfamily S26A unassigned peptidases MER0033848 CPR_1523
SF S26 unassigned subfamily S26A unassigned peptidases MER0026323 CPR_0564
SF S26 unassigned subfamily S26A unassigned peptidases MER0016925 CPF_0312
SF S26 unassigned subfamily S26A unassigned peptidases MER0246918 lepB AC3_0186
SF S26 unassigned subfamily S26B unassigned peptidases MER1337865
SH S78 unassigned family S78 unassigned peptidases MER0029927 AC3_1415
SH S78 unassigned family S78 unassigned peptidases MER0067496 AC1_2798
SH S78 unassigned family S78 unassigned peptidases MER0322993
SJ S16 S16.001 Lon-A peptidase MER0016919 lon HA1_08767
SJ S16 S16.005 Lon-B peptidase MER0016922 lonB HMPREF9476_01044
SJ S16 S16.005 Lon-B peptidase MER0016921 lon HA1_15246
SJ S16 S16.A04 DNA repair protein RadA (Escherichia coli) MER0016920 radA CPE2433
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER0201115 CPR_1676
SJ S16 non-peptidase homologue family S16 non-peptidase homologues MER1032491 CJD_1697/CPC_1481
SJ S16 unassigned family S16 unassigned peptidases MER0016923 HMPREF9476_01704
SK S14 S14.001 peptidase Clp (type 1) MER0016917 clpP CPR_1385
SK S14 S14.012 YmfB g.p. (Bacillus subtilis) MER0016918 clpP CPR_1649
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0160363 AC3_2558
SK S14 unassigned family S14 unassigned peptidases MER0360226 HA1_06392
SK S41 S41.004 C-terminal processing peptidase-3 MER0016926 AC7_0333
SS S66 S66.001 murein tetrapeptidase LD-carboxypeptidase (Pseudomonas-type) MER0039194 AC5_2850
SS S66 unassigned family S66 unassigned peptidases MER0026411 AC3_3089
ST S54 S54.014 rhomboid YqgP peptidase MER0016927 CPR_1438
U- U32 U32.002 collagenase (Helicobacter-type) MER0016929 CPR_1741
U- U32 unassigned family U32 unassigned peptidases MER0016930 AC7_2136
U- U32 unassigned family U32 unassigned peptidases MER0125901
U- U57 U57.001 yabG protein (Bacillus-type) MER0016931 AC1_2715

GENOME ANALYSIS: Comparison with 96 completely sequenced genomes from genus Clostridium
Family Comment
C11 significant presence (2 homologues)
C14 significant presence (1 homologues)
C60 lineage specific expansion (20 homologues)
C80 significant presence (1 homologues)
M4 significant presence (1 homologues)
M9 significant presence (2 homologues)
M103 significant presence (2 homologues)
M17 significant presence (1 homologues)
M60 significant presence (2 homologues)
P1 significant presence (1 homologues)
S24 lineage specific expansion (20 homologues)
S78 significant presence (3 homologues)